Task 96834251

Name	ebola_RdRp_v1_sidock_00006435_r1_s-24.0_1
Workunit	67507761
Created	27 Oct 2025, 13:07:19 UTC
Sent	29 Oct 2025, 2:42:18 UTC
Report deadline	2 Nov 2025, 2:42:18 UTC
Received	1 Nov 2025, 11:19:43 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54585
Run time	9 hours 39 min 31 sec
CPU time	9 hours 37 min 57 sec
Validate state	Valid
Credit	438.02
Device peak FLOPS	8.60 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	238.71 MB
Peak swap size	246.45 MB
Peak disk usage	19.81 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:35:06 (421544): wrapper (7.17.26016): starting
22:35:06 (421544): wrapper (7.17.26016): starting
22:35:06 (421544): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56c545e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x782cde845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x782cde89eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x782cde84527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x782cde8288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x782cde8297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x782cde8a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x782cde8ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x782cde8addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56c545e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56c545e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x782cde845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x782cde8ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x782cde8f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x782cde92975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56c545e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56c545e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x782cde82a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x782cde82a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56c545e1aa3a]

Exiting...
10:26:05 (512508): wrapper (7.17.26016): starting
10:26:05 (512508): wrapper (7.17.26016): starting
10:26:05 (512508): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x65083e43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70b6f8645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x70b6f869eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x70b6f864527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x70b6f86288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x70b6f86297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x70b6f86a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x70b6f86ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x70b6f86addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x65083e45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x65083e47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70b6f8645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x70b6f86ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x70b6f86f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x70b6f872975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x65083e451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x65083e41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x70b6f862a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x70b6f862a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x65083e41aa3a]

Exiting...
02:57:55 (224706): wrapper (7.17.26016): starting
02:57:55 (224706): wrapper (7.17.26016): starting
02:57:55 (224706): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:19:32 (224706): cmdock exited; CPU time 12094.124898
06:19:32 (224706): called boinc_finish(0)

</stderr_txt>
]]>