Task 96835435

Name	ebola_RdRp_v1_sidock_00009716_r4_s-24.0_1
Workunit	67520888
Created	27 Oct 2025, 18:26:20 UTC
Sent	29 Oct 2025, 3:52:35 UTC
Report deadline	2 Nov 2025, 3:52:35 UTC
Received	1 Nov 2025, 19:04:32 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54585
Run time	9 hours 29 min 18 sec
CPU time	9 hours 28 min 27 sec
Validate state	Valid
Credit	409.67
Device peak FLOPS	8.60 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.63 MB
Peak swap size	246.88 MB
Peak disk usage	19.97 MB
Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
00:00:45 (432061): wrapper (7.17.26016): starting
00:00:45 (432061): wrapper (7.17.26016): starting
00:00:45 (432061): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6495a843ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x751285245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75128529eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75128524527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7512852288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7512852297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7512852a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7512852ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7512852addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6495a845c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6495a847b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x751285245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7512852ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7512852f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75128532975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6495a8451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6495a841e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75128522a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75128522a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6495a841aa3a]

Exiting...
11:42:20 (524225): wrapper (7.17.26016): starting
11:42:20 (524225): wrapper (7.17.26016): starting
11:42:20 (524225): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c85ac83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x768bf4c45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x768bf4c9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x768bf4c4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x768bf4c288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x768bf4c297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x768bf4ca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x768bf4cab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x768bf4caddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c85ac85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c85ac87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x768bf4c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x768bf4cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x768bf4cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x768bf4d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c85ac851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c85ac81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x768bf4c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x768bf4c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c85ac81aa3a]

Exiting...
03:30:15 (229575): wrapper (7.17.26016): starting
03:30:15 (229575): wrapper (7.17.26016): starting
03:30:15 (229575): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x622a5c43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b234be45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7b234be9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7b234be4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7b234be288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7b234be297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7b234bea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7b234beab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7b234beaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x622a5c45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x622a5c47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b234be45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b234beecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b234bef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b234bf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x622a5c451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x622a5c41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b234be2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b234be2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x622a5c41aa3a]

Exiting...
09:55:02 (279031): wrapper (7.17.26016): starting
09:55:02 (279031): wrapper (7.17.26016): starting
09:55:02 (279031): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:04:21 (279031): cmdock exited; CPU time 14953.910188
14:04:21 (279031): called boinc_finish(0)

</stderr_txt>
]]>