Task 96836157

Name	ebola_RdRp_v1_sidock_00010645_r4_s-24.0_1
Workunit	67524604
Created	27 Oct 2025, 21:59:46 UTC
Sent	29 Oct 2025, 4:39:32 UTC
Report deadline	2 Nov 2025, 4:39:32 UTC
Received	1 Nov 2025, 16:05:29 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	7 hours 16 min 40 sec
CPU time	7 hours 14 min 46 sec
Validate state	Valid
Credit	363.84
Device peak FLOPS	9.64 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.62 MB
Peak swap size	246.87 MB
Peak disk usage	19.78 MB
Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
00:30:02 (125501): wrapper (7.17.26016): starting
00:30:02 (125501): wrapper (7.17.26016): starting
00:30:02 (125501): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62f53463ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73508d045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x73508d09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x73508d04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x73508d0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x73508d0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x73508d0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x73508d0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x73508d0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62f53465c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62f53467b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73508d045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73508d0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73508d0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73508d12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62f534651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62f53461e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73508d02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73508d02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62f53461aa3a]

Exiting...
14:28:59 (234191): wrapper (7.17.26016): starting
14:28:59 (234191): wrapper (7.17.26016): starting
14:28:59 (234191): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c2d5f23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x779671645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x77967169eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x77967164527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7796716288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7796716297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7796716a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7796716ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7796716addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c2d5f25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c2d5f27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x779671645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7796716ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7796716f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77967172975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c2d5f251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c2d5f21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77967162a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77967162a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c2d5f21aa3a]

Exiting...
03:43:29 (269435): wrapper (7.17.26016): starting
03:43:29 (269435): wrapper (7.17.26016): starting
03:43:29 (269435): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5da40f23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b88aea45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7b88aea9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7b88aea4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7b88aea288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7b88aea297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7b88aeaa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7b88aeaab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7b88aeaaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5da40f25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5da40f27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b88aea45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b88aeaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b88aeaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b88aeb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5da40f251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5da40f21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b88aea2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b88aea2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5da40f21aa3a]

Exiting...
09:50:02 (316071): wrapper (7.17.26016): starting
09:50:02 (316071): wrapper (7.17.26016): starting
09:50:02 (316071): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:05:18 (316071): cmdock exited; CPU time 4515.407015
11:05:18 (316071): called boinc_finish(0)

</stderr_txt>
]]>