Task 96837938

Name ebola_RdRp_v1_sample_00985800_r2_s-18.0_1
Workunit 67442862
Created 28 Oct 2025, 10:26:56 UTC
Sent 29 Oct 2025, 6:25:10 UTC
Report deadline 2 Nov 2025, 6:25:10 UTC
Received 29 Oct 2025, 22:49:14 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 5 hours 48 min 33 sec
CPU time 5 hours 48 min 15 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.15 MB
Peak swap size 247.81 MB
Peak disk usage 20.79 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:30:28 (10757): wrapper (7.17.26016): starting
01:30:28 (10757): wrapper (7.17.26016): starting
01:30:28 (10757): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5e4a3103ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7126f0845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7126f089eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7126f084527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7126f08288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7126f08297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7126f08a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7126f08ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7126f08addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5e4a3105c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5e4a3107b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7126f0845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7126f08ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7126f08f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7126f092975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5e4a31051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5e4a3101e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7126f082a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7126f082a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5e4a3101aa3a]

Exiting...
02:36:56 (2621): wrapper (7.17.26016): starting
02:36:56 (2621): wrapper (7.17.26016): starting
02:36:56 (2621): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:58:12 (2638): wrapper (7.17.26016): starting
11:58:12 (2638): wrapper (7.17.26016): starting
11:58:12 (2638): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:35:12 (2648): wrapper (7.17.26016): starting
17:35:12 (2648): wrapper (7.17.26016): starting
17:35:12 (2648): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:42:16 (2651): wrapper (7.17.26016): starting
17:42:16 (2651): wrapper (7.17.26016): starting
17:42:16 (2651): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:42:22 (2651): cmdock exited; CPU time 5.403367
17:42:22 (2651): called boinc_finish(0)

</stderr_txt>
]]>


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