Task 96837973

Name ebola_RdRp_v1_sample_00987500_r1_s-18.0_1
Workunit 67442929
Created 28 Oct 2025, 10:27:51 UTC
Sent 29 Oct 2025, 6:28:31 UTC
Report deadline 2 Nov 2025, 6:28:31 UTC
Received 2 Nov 2025, 6:35:03 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60274
Run time 8 hours 19 min 8 sec
CPU time 8 hours 18 min 56 sec
Validate state Valid
Credit 424.42
Device peak FLOPS 10.02 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.41 MB
Peak swap size 247.20 MB
Peak disk usage 21.76 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
22:20:57 (88132): wrapper (7.17.26016): starting
22:20:57 (88132): wrapper (7.17.26016): starting
22:20:57 (88132): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59162fe3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72dd7b245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72dd7b29eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72dd7b24527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72dd7b2288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72dd7b2297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x72dd7b2a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x72dd7b2ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72dd7b2addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59162fe5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59162fe7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72dd7b245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72dd7b2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72dd7b2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72dd7b32975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x59162fe51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59162fe1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72dd7b22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72dd7b22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59162fe1aa3a]

Exiting...
11:25:06 (189424): wrapper (7.17.26016): starting
11:25:06 (189424): wrapper (7.17.26016): starting
11:25:06 (189424): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:24:25 (575544): wrapper (7.17.26016): starting
13:24:25 (575544): wrapper (7.17.26016): starting
13:24:25 (575544): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (632487): wrapper (7.17.26016): starting
21:00:02 (632487): wrapper (7.17.26016): starting
21:00:02 (632487): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:34:16 (632487): cmdock exited; CPU time 16451.719635
01:34:16 (632487): called boinc_finish(0)

</stderr_txt>
]]>


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