Task 96839124

Name ebola_RdRp_v1_sidock_00003431_r3_s-24.0_1
Workunit 67495747
Created 28 Oct 2025, 17:05:58 UTC
Sent 29 Oct 2025, 7:47:28 UTC
Report deadline 2 Nov 2025, 7:47:28 UTC
Received 30 Oct 2025, 3:11:37 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 76200
Run time 1 hours 0 min 25 sec
CPU time 1 hours 0 min 18 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.45 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.91 MB
Peak swap size 246.65 MB
Peak disk usage 19.66 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:57:14 (28619): wrapper (7.17.26016): starting
05:57:14 (28619): wrapper (7.17.26016): starting
05:57:14 (28619): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/26/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c63c6c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7df13d045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7df13d09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7df13d04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7df13d0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7df13d0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7df13d0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7df13d0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7df13d0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c63c6c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c63c6c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7df13d045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7df13d0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7df13d0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7df13d12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c63c6c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c63c6c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7df13d02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7df13d02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c63c6c1aa3a]

Exiting...
12:56:54 (84742): wrapper (7.17.26016): starting
12:56:54 (84742): wrapper (7.17.26016): starting
12:56:54 (84742): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/26/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:20:41 (162593): wrapper (7.17.26016): starting
21:20:41 (162593): wrapper (7.17.26016): starting
21:20:41 (162593): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/26/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:20:45 (162593): cmdock exited; CPU time 2.939417
21:20:45 (162593): called boinc_finish(0)

</stderr_txt>
]]>


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