Task 96839155

Name ebola_RdRp_v1_sidock_00003419_r4_s-24.0_1
Workunit 67495700
Created 28 Oct 2025, 17:05:59 UTC
Sent 29 Oct 2025, 7:48:02 UTC
Report deadline 2 Nov 2025, 7:48:02 UTC
Received 30 Oct 2025, 3:11:37 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 76200
Run time 4 sec
CPU time 2 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.45 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 3.44 MB
Peak swap size 6.06 MB
Peak disk usage 19.67 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
12:56:54 (84755): wrapper (7.17.26016): starting
12:56:54 (84755): wrapper (7.17.26016): starting
12:56:54 (84755): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x588d7f23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77ca40445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x77ca4049eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x77ca4044527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x77ca404288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x77ca404297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x77ca404a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x77ca404ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x77ca404addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x588d7f25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x588d7f27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77ca40445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77ca404ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77ca404f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77ca4052975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x588d7f251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x588d7f21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77ca4042a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77ca4042a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x588d7f21aa3a]

Exiting...
21:20:58 (162634): wrapper (7.17.26016): starting
21:20:58 (162634): wrapper (7.17.26016): starting
21:20:58 (162634): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:21:01 (162634): cmdock exited; CPU time 2.844723
21:21:01 (162634): called boinc_finish(0)

</stderr_txt>
]]>


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