Task 96907820

Name ebola_RdRp_v1_sidock_00021704_r1_s-24.0_0
Workunit 67628829
Created 29 Oct 2025, 9:39:00 UTC
Sent 29 Oct 2025, 17:56:56 UTC
Report deadline 2 Nov 2025, 17:56:56 UTC
Received 2 Nov 2025, 3:39:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 76200
Run time 6 hours 19 min 22 sec
CPU time 6 hours 19 min 14 sec
Validate state Valid
Credit 426.13
Device peak FLOPS 10.45 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.25 MB
Peak swap size 247.09 MB
Peak disk usage 19.73 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
21:21:04 (162655): wrapper (7.17.26016): starting
21:21:04 (162655): wrapper (7.17.26016): starting
21:21:04 (162655): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x60f089e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75c491245330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x75c4912add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x60f089e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x60f089e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75c491245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75c4912ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75c4912f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75c49132975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x60f089e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x60f089e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75c49122a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75c49122a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x60f089e1aa3a]

Exiting...
22:19:15 (363065): wrapper (7.17.26016): starting
22:19:15 (363065): wrapper (7.17.26016): starting
22:19:15 (363065): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (50820): wrapper (7.17.26016): starting
21:00:02 (50820): wrapper (7.17.26016): starting
21:00:02 (50820): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:39:11 (50820): cmdock exited; CPU time 5947.808011
22:39:11 (50820): called boinc_finish(0)

</stderr_txt>
]]>


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