Task 97225113

Name	ebola_RdRp_v1_sidock_00095068_r2_s-24.0_0
Workunit	67922286
Created	9 Nov 2025, 16:51:36 UTC
Sent	11 Nov 2025, 17:06:04 UTC
Report deadline	15 Nov 2025, 17:06:04 UTC
Received	12 Nov 2025, 14:14:19 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	80554
Run time	13 hours 10 min 48 sec
CPU time	13 hours 5 min 55 sec
Validate state	Valid
Credit	578.45
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.05 MB
Peak swap size	247.75 MB
Peak disk usage	19.99 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:13:30 (647355): wrapper (7.17.26016): starting
10:13:30 (647355): wrapper (7.17.26016): starting
10:13:30 (647355): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6195c3e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x780819445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x78081949eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x78081944527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7808194288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7808194297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7808194a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7808194ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7808194addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6195c3e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6195c3e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x780819445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7808194ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7808194f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x78081952975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6195c3e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6195c3e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x78081942a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x78081942a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6195c3e1aa3a]

Exiting...
15:11:59 (670239): wrapper (7.17.26016): starting
15:11:59 (670239): wrapper (7.17.26016): starting
15:11:59 (670239): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57f2c783ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70671fa45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x70671fa9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x70671fa4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x70671fa288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x70671fa297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x70671faa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x70671faab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x70671faaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57f2c785c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57f2c787b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70671fa45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x70671faecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x70671faf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x70671fb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57f2c7851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57f2c781e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x70671fa2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x70671fa2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57f2c781aa3a]

Exiting...
01:38:46 (706202): wrapper (7.17.26016): starting
01:38:46 (706202): wrapper (7.17.26016): starting
01:38:46 (706202): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:14:06 (706202): cmdock exited; CPU time 20006.506576
07:14:06 (706202): called boinc_finish(0)

</stderr_txt>
]]>