Task 97225139

Name	ebola_RdRp_v1_sidock_00095074_r4_s-24.0_0
Workunit	67922312
Created	9 Nov 2025, 16:51:37 UTC
Sent	11 Nov 2025, 17:06:04 UTC
Report deadline	15 Nov 2025, 17:06:04 UTC
Received	12 Nov 2025, 13:45:41 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	80554
Run time	12 hours 36 min 30 sec
CPU time	12 hours 31 min 39 sec
Validate state	Valid
Credit	551.27
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.56 MB
Peak swap size	246.97 MB
Peak disk usage	19.94 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:21:51 (647386): wrapper (7.17.26016): starting
10:21:51 (647386): wrapper (7.17.26016): starting
10:21:51 (647386): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c7648a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79cf60845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x79cf6089eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x79cf6084527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x79cf608288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x79cf608297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x79cf608a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x79cf608ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x79cf608addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c7648a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c7648a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79cf60845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x79cf608ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x79cf608f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x79cf6092975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c7648a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c7648a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79cf6082a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79cf6082a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c7648a1aa3a]

Exiting...
15:11:59 (670240): wrapper (7.17.26016): starting
15:11:59 (670240): wrapper (7.17.26016): starting
15:11:59 (670240): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59af2fe3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x777e7ce45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x777e7ce9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x777e7ce4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x777e7ce288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x777e7ce297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x777e7cea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x777e7ceab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x777e7ceaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59af2fe5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59af2fe7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x777e7ce45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x777e7ceecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x777e7cef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x777e7cf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x59af2fe51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59af2fe1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x777e7ce2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x777e7ce2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59af2fe1aa3a]

Exiting...
01:38:46 (706204): wrapper (7.17.26016): starting
01:38:46 (706204): wrapper (7.17.26016): starting
01:38:46 (706204): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:45:25 (706204): cmdock exited; CPU time 18305.273659
06:45:25 (706204): called boinc_finish(0)

</stderr_txt>
]]>