Task 468185


Deprecated: Implicit conversion from float-string "33768.6697" to int loses precision in /home/boincadm/projects/sidock/html/inc/util.inc on line 424

Deprecated: Implicit conversion from float-string "33753.39" to int loses precision in /home/boincadm/projects/sidock/html/inc/util.inc on line 424
Name ebola_RdRp_v1_sidock_00822489_r5_s-24.0_0
Workunit 410042
Created 6 Sep 2026, 0:12:00 UTC
Sent 6 Sep 2026, 23:00:02 UTC
Report deadline 10 Sep 2026, 23:00:02 UTC
Received 9 Sep 2026, 1:16:08 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 80661
Run time 9 hours 22 min 48 sec
CPU time 9 hours 22 min 33 sec
Validate state Valid
Credit 674.83
Device peak FLOPS 7.29 GFLOPS
Application version SiDock@home CurieMarieDock v1.00
x86_64-pc-linux-gnu
Peak working set size 239.67 MB
Peak swap size 246.72 MB
Peak disk usage 20.35 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:12:38 (16881): wrapper (7.17.26016): starting
19:12:38 (16881): wrapper (7.17.26016): starting
19:12:38 (16881): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c) [0x560b9063ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f8c13e61df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x7f8c13eb695c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x7f8c13e61cc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x7f8c13e4a4ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x7f8c13e4b291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x7f8c13ec0465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x7f8c13ec541c]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd) [0x560b9065c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4) [0x560b9067b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f8c13e61df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f8c13ebc9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f8c13eb1668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f8c13efdfba]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f8c13f093d3]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f8c13f323b3]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf) [0x560b90651adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784) [0x560b9061e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f8c13e4bca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f8c13e4bd65]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a) [0x560b9061aa3a]

Exiting...
03:39:22 (8040): wrapper (7.17.26016): starting
03:39:22 (8040): wrapper (7.17.26016): starting
03:39:22 (8040): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c) [0x563e9b23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f13ae0a8df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f13ae10c2a2]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd) [0x563e9b25c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4) [0x563e9b27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f13ae0a8df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f13ae1039ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f13ae0f8668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f13ae144fba]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f13ae1503d3]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f13ae1793b3]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf) [0x563e9b251adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784) [0x563e9b21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f13ae092ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f13ae092d65]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a) [0x563e9b21aa3a]

Exiting...
20:01:09 (1892): wrapper (7.17.26016): starting
20:01:09 (1892): wrapper (7.17.26016): starting
20:01:09 (1892): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:15:58 (1892): sidock exited; CPU time 4169.389323
21:15:58 (1892): called boinc_finish(0)

</stderr_txt>
]]>


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