Task 75562


Deprecated: Implicit conversion from float-string "32452.996515" to int loses precision in /home/boincadm/projects/sidock/html/inc/util.inc on line 424

Deprecated: Implicit conversion from float-string "32445.93" to int loses precision in /home/boincadm/projects/sidock/html/inc/util.inc on line 424
Name ebola_RdRp_v1_sidock_00738846_r5_s-24.0_0
Workunit 75393
Created 18 Jul 2026, 21:39:15 UTC
Sent 26 Jul 2026, 4:59:30 UTC
Report deadline 30 Jul 2026, 4:59:30 UTC
Received 28 Jul 2026, 8:13:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54588
Run time 9 hours 0 min 52 sec
CPU time 9 hours 0 min 45 sec
Validate state Valid
Credit 723.60
Device peak FLOPS 9.71 GFLOPS
Application version SiDock@home CurieMarieDock v1.00
x86_64-pc-linux-gnu
Peak working set size 240.57 MB
Peak swap size 247.59 MB
Peak disk usage 20.32 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:37:24 (501745): wrapper (7.17.26016): starting
02:37:24 (501745): wrapper (7.17.26016): starting
02:37:24 (501745): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x55973a23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x728d30845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x728d3089eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x728d3084527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x728d308288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x728d308297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x728d308a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x728d308ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x728d308addce]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x55973a25c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x55973a27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x728d30845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x728d308ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x728d308f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x728d3092975c]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x55973a251adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x55973a21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x728d3082a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x728d3082a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x55973a21aa3a]

Exiting...
04:52:37 (701240): wrapper (7.17.26016): starting
04:52:37 (701240): wrapper (7.17.26016): starting
04:52:37 (701240): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x5658a5c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x704d23245330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x704d232add75]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x5658a5c5c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x5658a5c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x704d23245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x704d232ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x704d232f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x704d2332975c]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x5658a5c51adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x5658a5c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x704d2322a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x704d2322a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x5658a5c1aa3a]

Exiting...
21:05:41 (822841): wrapper (7.17.26016): starting
21:05:41 (822841): wrapper (7.17.26016): starting
21:05:41 (822841): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:12:53 (822841): sidock exited; CPU time 19738.924365
03:12:53 (822841): called boinc_finish(0)

</stderr_txt>
]]>


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