Ninth and tenth targets

Message boards : News : Ninth and tenth targets
Message board moderation

To post messages, you must log in.

AuthorMessage
Profile Natalia
Project administrator
Project developer

Send message
Joined: 9 Oct 20
Posts: 154
Credit: 627,560
RAC: 3,384
Message 1353 - Posted: 13 Nov 2021, 9:39:16 UTC
Last modified: 20 Nov 2021, 11:19:45 UTC

Dear participants,

We have a new target which resides at a novel allosteric site on SARS-CoV-2 main protease. The site was identified by MixMD method [1] with collaboration at College of Pharmacy, University of Michigan. Target preparation was helped by Jelena Tošović (Slovenia).

The two upcoming targets and results will complement the allosteric sites identified with X-ray screening by Sebastian Günther et al. [2]. The targets have good chances for wet-lab testing as soon as possible and further experimental support.

(We will again temporarily pause processing of Target 5)

With best wishes,
Team SiDock@home

[1] Phani Ghanakota and Heather A. Carlson. Moving Beyond Active-Site Detection: MixMD Applied to Allosteric Systems. The Journal of Physical Chemistry B 2016 120 (33), 8685-8695. DOI: 10.1021/acs.jpcb.6b03515
[2] Sebastian Günther et al. X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease. Science 2021 372 (6542), 642-646. DOI: 10.1126/science.abf7945
ID: 1353 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile Plejaden
Avatar

Send message
Joined: 24 Oct 20
Posts: 5
Credit: 140,827
RAC: 961
Message 1355 - Posted: 13 Nov 2021, 20:15:26 UTC

Congratulations ! :-)
ID: 1355 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile Bill F
Avatar

Send message
Joined: 3 Dec 20
Posts: 3
Credit: 75,962
RAC: 267
Message 1356 - Posted: 13 Nov 2021, 23:46:58 UTC - in response to Message 1353.  

Definitely ... Congratulations
ID: 1356 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
mikey
Avatar

Send message
Joined: 24 Oct 20
Posts: 4
Credit: 828,994
RAC: 683
Message 1357 - Posted: 14 Nov 2021, 3:21:00 UTC

WOO HOO!!!
ID: 1357 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
hoarfrost
Project administrator
Project developer

Send message
Joined: 11 Oct 20
Posts: 176
Credit: 12,426,263
RAC: 19,832
Message 1361 - Posted: 19 Nov 2021, 22:34:24 UTC

Hi! A new version of CmDock application has been released. Progress reporting have been fixed. :)
ID: 1361 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Bryn Mawr

Send message
Joined: 16 Aug 21
Posts: 9
Credit: 1,727,313
RAC: 10,387
Message 1362 - Posted: 20 Nov 2021, 0:34:14 UTC - in response to Message 1361.  

Hi! A new version of CmDock application has been released. Progress reporting have been fixed. :)


Wonderful, thank you. It might not have affected the function but it was very annoying.
ID: 1362 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile Natalia
Project administrator
Project developer

Send message
Joined: 9 Oct 20
Posts: 154
Credit: 627,560
RAC: 3,384
Message 1363 - Posted: 20 Nov 2021, 11:20:10 UTC

Update: the 10th target goes in a tight bundle with the 9th :)
ID: 1363 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
ataraxy

Send message
Joined: 1 Jan 21
Posts: 14
Credit: 564,745
RAC: 1,522
Message 1364 - Posted: 21 Nov 2021, 8:06:34 UTC - in response to Message 1361.  

Hi! A new version of CmDock application has been released. Progress reporting have been fixed. :)


hoarfrost: Will the Linux running on ARM, hardware FP version of the application be updated as well? At the moment it is still v1.00 - see https://www.sidock.si/sidock/apps.php

Thanks
ID: 1364 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
hoarfrost
Project administrator
Project developer

Send message
Joined: 11 Oct 20
Posts: 176
Credit: 12,426,263
RAC: 19,832
Message 1366 - Posted: 21 Nov 2021, 16:46:53 UTC

Hi! ARM+Linux application was updated today. :)
ID: 1366 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Buro87 [Lombardia]

Send message
Joined: 23 Nov 20
Posts: 27
Credit: 689,088
RAC: 2,564
Message 1369 - Posted: 22 Nov 2021, 8:29:38 UTC

Congratulation to the whole Team... Well done !
ID: 1369 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
ataraxy

Send message
Joined: 1 Jan 21
Posts: 14
Credit: 564,745
RAC: 1,522
Message 1370 - Posted: 22 Nov 2021, 15:31:45 UTC - in response to Message 1366.  

Hi! ARM+Linux application was updated today. :)

Thanks hoarfrost and others!

I have set my Raspberry Pis to allow new work, so I'll see how it goes.
ID: 1370 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
hoarfrost
Project administrator
Project developer

Send message
Joined: 11 Oct 20
Posts: 176
Credit: 12,426,263
RAC: 19,832
Message 1385 - Posted: 11 Dec 2021, 19:35:35 UTC

Last bunch of 3CLpro_v8 tasks were sent and we return to fifth target - Eprot_v1 (run 2). Thank you for project support!
ID: 1385 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote

Message boards : News : Ninth and tenth targets

©2022 SiDock@home Team