Posts by biodoc

1) Message boards : News : Release CmDock v 0.1.2 (Message 945)
Posted 22 May 2021 by biodoc
Post:
No issues so far. :)
2) Message boards : News : Release CmDock v 0.1.2 (Message 938)
Posted 21 May 2021 by biodoc
Post:
The permissions look ok.
-rwxr-xr-x  1 boinc boinc  367288 May 21 13:27 cmdock_v0.1.2_x86_64-pc-linux-gnu
-rw-r--r--  1 boinc boinc  217675 May 21 13:27 CmDock_v0.1.2_x86_64-pc-linux-gnu.zip
-rwxr-xr-x  1 boinc boinc 4429872 May 21 13:27 cmdock-boinc-zip_wrapper_2.3_x86_64-pc-linux-gnu


EDIT: added the wrapper
3) Message boards : News : Release CmDock v 0.1.2 (Message 936)
Posted 21 May 2021 by biodoc
Post:
Hello!

New version 2.03 of application for Linux available. Works on my PC with Ubuntu.


Do you have any specific instructions on how you were able to get it to work? All 2.03 tasks are failing on my linux mint 20.1 computers.

Correction: 2 of my computers are processing the tasks successfully. I'll try detaching/attaching the project on the one that's giving errors.
4) Message boards : News : Release CmDock v 0.1.2 (Message 935)
Posted 21 May 2021 by biodoc
Post:
I've seen a few versions come and go this morning, each with different errors. However I just tried 2.03 on Fedora 33 and it fails as below. (Version 1 works fine).

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
12:52:59 (71949): wrapper (7.17.26016): starting
12:52:59 (71949): wrapper (7.17.26016): starting
12:52:59 (71949): wrapper: running cmdock (-c -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
execv() failed: : Permission denied
12:53:00 (71949): cmdock exited; CPU time 0.000275
12:53:00 (71949): app exit status: 0x6c
12:53:00 (71949): called boinc_finish(195)

</stderr_txt>
]]>


I'm seeing the same error with version 2.03 on Linux Mint 20.1 [5.4.0-73-generic|libc 2.31 (Ubuntu GLIBC 2.31-0ubuntu9.2)]. Version 1 works fine.




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