Task 100053722

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<message>
process exited with code 193 (0xc1, -63)</message>
<stderr_txt>
11:28:59 (3882399): wrapper (7.17.26016): starting
11:29:00 (3882399): wrapper (7.17.26016): starting
11:29:00 (3882399): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:29:32 (3910864): wrapper (7.17.26016): starting
15:29:32 (3910864): wrapper (7.17.26016): starting
15:29:32 (3910864): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (15 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x558c4023ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7f5e7f0849e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7f5e7f0e03fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x558c4025c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x558c4027b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7f5e7f0849e0]
/usr/lib64/libc.so.6(+0x4c61d)[0x7f5e7f09a61d]
/usr/lib64/libc.so.6(+0x57335)[0x7f5e7f0a5335]
/usr/lib64/libc.so.6(+0x72414)[0x7f5e7f0c0414]
/usr/lib64/libc.so.6(__sprintf_chk+0xa0)[0x7f5e7f15a480]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3a7ee)[0x558c4023a7ee]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e667)[0x558c4021e667]
/usr/lib64/libc.so.6(+0x23737)[0x7f5e7f071737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7f5e7f0717f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x558c4021aa3a]

Exiting...
22:17:00 (593344): wrapper (7.17.26016): starting
22:17:01 (593344): wrapper (7.17.26016): starting
22:17:01 (593344): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:18:32 (595341): wrapper (7.17.26016): starting
22:18:32 (595341): wrapper (7.17.26016): starting
22:18:32 (595341): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:17:47 (598084): wrapper (7.17.26016): starting
23:17:48 (598084): wrapper (7.17.26016): starting
23:17:48 (598084): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:08:18 (638658): wrapper (7.17.26016): starting
13:08:19 (638658): wrapper (7.17.26016): starting
13:08:19 (638658): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:33:40 (1320869): wrapper (7.17.26016): starting
18:33:40 (1320869): wrapper (7.17.26016): starting
18:33:40 (1320869): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x561acf03ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7f580b9da9e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7f580ba363fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x561acf05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x561acf07b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7f580b9da9e0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aed2)[0x561acf03aed2]
/usr/lib64/libc.so.6(+0x369e0)[0x7f580b9da9e0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f580ba6a885]
/usr/lib64/libc.so.6(nanosleep+0x13)[0x7f580ba6f0e3]
/usr/lib64/libc.so.6(usleep+0x35)[0x7f580ba993d5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x561acf051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x561acf01e784]
/usr/lib64/libc.so.6(+0x23737)[0x7f580b9c7737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7f580b9c77f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x561acf01aa3a]

Exiting...
17:37:44 (114756): wrapper (7.17.26016): starting
17:37:44 (114756): wrapper (7.17.26016): starting
17:37:44 (114756): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (18 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56350f23ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7f661301f9e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7f661307b3fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56350f25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56350f27b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7f661301f9e0]
/usr/lib64/libc.so.6(read+0x4c)[0x7f66130d77dc]
/usr/lib64/libc.so.6(_IO_file_underflow+0x18c)[0x7f66130655dc]
/usr/lib64/libc.so.6(_IO_default_uflow+0x32)[0x7f6613066952]
/usr/lib64/libc.so.6(_IO_getline_info+0xaa)[0x7f6613059c8a]
/usr/lib64/libc.so.6(fgets+0x9c)[0x7f6613058aec]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x526d3)[0x56350f2526d3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x4d0c9)[0x56350f24d0c9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1d8fb)[0x56350f21d8fb]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e61b)[0x56350f21e61b]
/usr/lib64/libc.so.6(+0x23737)[0x7f661300c737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7f661300c7f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56350f21aa3a]

Exiting...
20:23:50 (462878): wrapper (7.17.26016): starting
20:23:51 (462878): wrapper (7.17.26016): starting
20:23:51 (462878): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (18 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5609a583ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7fa7fd36f9e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7fa7fd3cb3fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5609a585c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5609a587b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7fa7fd36f9e0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x5609a583aec0]
/usr/lib64/libc.so.6(+0x369e0)[0x7fa7fd36f9e0]
/usr/lib64/libc.so.6(read+0x4c)[0x7fa7fd4277dc]
/usr/lib64/libc.so.6(_IO_file_underflow+0x18c)[0x7fa7fd3b55dc]
/usr/lib64/libc.so.6(_IO_default_uflow+0x32)[0x7fa7fd3b6952]
/usr/lib64/libc.so.6(_IO_getline_info+0xaa)[0x7fa7fd3a9c8a]
/usr/lib64/libc.so.6(fgets+0x9c)[0x7fa7fd3a8aec]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1f0d1)[0x5609a581f0d1]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e5af)[0x5609a581e5af]
/usr/lib64/libc.so.6(+0x23737)[0x7fa7fd35c737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7fa7fd35c7f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5609a581aa3a]

Exiting...

</stderr_txt>
]]>

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