Task 100072277

Name ebola_RdRp_v1_sidock_00680290_r2_s-24.0_2
Workunit 70263174
Created 14 Mar 2026, 20:15:19 UTC
Sent 17 Mar 2026, 9:51:00 UTC
Report deadline 21 Mar 2026, 9:51:00 UTC
Received 21 Mar 2026, 6:55:15 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 70402
Run time 10 hours 29 min 2 sec
CPU time 10 hours 20 min 5 sec
Validate state Valid
Credit 519.47
Device peak FLOPS 5.99 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.04 MB
Peak swap size 247.87 MB
Peak disk usage 20.21 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:59:43 (239787): wrapper (7.17.26016): starting
14:59:43 (239787): wrapper (7.17.26016): starting
14:59:43 (239787): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x561b75a3ff8c]
/usr/lib/libc.so.6(+0x3e2d0) [0x7fdb039a32d0]
/usr/lib/libc.so.6(+0x98a2c) [0x7fdb039fda2c]
/usr/lib/libc.so.6(gsignal+0x20) [0x7fdb039a31a0]
/usr/lib/libc.so.6(abort+0x26) [0x7fdb0398a5fe]
/usr/lib/libc.so.6(+0x26697) [0x7fdb0398b697]
/usr/lib/libc.so.6(+0xa2cbc) [0x7fdb03a07cbc]
/usr/lib/libc.so.6(+0xa2cd4) [0x7fdb03a07cd4]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x561b75a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x561b75a7b8e4]
/usr/lib/libc.so.6(+0x3e2d0) [0x7fdb039a32d0]
/usr/lib/libc.so.6(+0x9ef32) [0x7fdb03a03f32]
/usr/lib/libc.so.6(+0x9339c) [0x7fdb039f839c]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x7fdb03a48452]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7fdb03a54537]
/usr/lib/libc.so.6(usleep+0x4a) [0x7fdb03a7ee2a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x561b75a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x561b75a1e784]
/usr/lib/libc.so.6(+0x276c1) [0x7fdb0398c6c1]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x7fdb0398c7f9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x561b75a1aa3a]

Exiting...
16:39:57 (19654): wrapper (7.17.26016): starting
16:39:57 (19654): wrapper (7.17.26016): starting
16:39:57 (19654): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:00:03 (19654): cmdock exited; CPU time 11510.551911
22:00:03 (19654): called boinc_finish(0)

</stderr_txt>
]]>


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