Task 100164704

Name ebola_RdRp_v1_sidock_00729257_r1_s-24.0_1
Workunit 70459041
Created 19 Mar 2026, 21:41:45 UTC
Sent 20 Mar 2026, 16:15:13 UTC
Report deadline 24 Mar 2026, 16:15:13 UTC
Received 21 Mar 2026, 10:11:46 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83095
Run time 16 hours 4 min 59 sec
CPU time 15 hours 46 min 1 sec
Validate state Valid
Credit 584.71
Device peak FLOPS 5.24 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.88 MB
Peak swap size 246.93 MB
Peak disk usage 20.44 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:02:39 (590890): wrapper (7.17.26016): starting
18:02:39 (590890): wrapper (7.17.26016): starting
18:02:39 (590890): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid size
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x56260f23ff8c]
/lib64/libc.so.6(+0x428e0) [0x7fb9c38428e0]
/lib64/libc.so.6(+0x9dc9c) [0x7fb9c389dc9c]
/lib64/libc.so.6(gsignal+0x18) [0x7fb9c3842786]
/lib64/libc.so.6(abort+0x2a) [0x7fb9c382934b]
/lib64/libc.so.6(+0x2a3ad) [0x7fb9c382a3ad]
/lib64/libc.so.6(+0xa8ab7) [0x7fb9c38a8ab7]
/lib64/libc.so.6(+0xa8ae1) [0x7fb9c38a8ae1]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x56260f25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x56260f27b8e4]
/lib64/libc.so.6(+0x428e0) [0x7fb9c38428e0]
/lib64/libc.so.6(+0xa4772) [0x7fb9c38a4772]
/lib64/libc.so.6(+0x97f68) [0x7fb9c3897f68]
/lib64/libc.so.6(clock_nanosleep+0x30) [0x7fb9c38e8efe]
/lib64/libc.so.6(nanosleep+0x19) [0x7fb9c38f4f27]
/lib64/libc.so.6(usleep+0x49) [0x7fb9c3920657]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x56260f251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x56260f21e784]
/lib64/libc.so.6(+0x2b2fb) [0x7fb9c382b2fb]
/lib64/libc.so.6(__libc_start_main+0x8d) [0x7fb9c382b3cb]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x56260f21aa3a]

Exiting...
18:46:04 (2567): wrapper (7.17.26016): starting
18:46:04 (2567): wrapper (7.17.26016): starting
18:46:05 (2567): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:11:36 (2567): cmdock exited; CPU time 54480.577556
10:11:36 (2567): called boinc_finish(0)

</stderr_txt>
]]>


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