Task 100166319

Name ebola_RdRp_v1_sidock_00738837_r3_s-24.0_1
Workunit 70497363
Created 20 Mar 2026, 11:01:26 UTC
Sent 20 Mar 2026, 17:54:49 UTC
Report deadline 24 Mar 2026, 17:54:49 UTC
Received 21 Mar 2026, 13:40:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 29183
Run time 12 hours 53 min 58 sec
CPU time 12 hours 52 min 5 sec
Validate state Valid
Credit 657.59
Device peak FLOPS 6.91 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.90 MB
Peak swap size 246.43 MB
Peak disk usage 20.42 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:55:12 (5646): wrapper (7.17.26016): starting
13:55:12 (5646): wrapper (7.17.26016): starting
13:55:12 (5646): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x560f5e43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f4d175da520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f4d1762e9fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f4d175da476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f4d175c07f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89677)[0x7f4d17621677]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f4d17638cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f4d1763aa44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f4d1763d453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x560f5e45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x560f5e47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f4d175da520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f4d1767d7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f4d17682677]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e)[0x7f4d176825ae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x560f5e451a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x560f5e41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f4d175c1d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f4d175c1e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x560f5e41aa3a]

Exiting...
14:15:47 (2393): wrapper (7.17.26016): starting
14:15:49 (2393): wrapper (7.17.26016): starting
14:15:49 (2393): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:39:56 (2393): cmdock exited; CPU time 45555.838106
09:39:56 (2393): called boinc_finish(0)

</stderr_txt>
]]>


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