Task 100166351

Name ebola_RdRp_v1_sidock_00759583_r2_s-24.0_1
Workunit 70580346
Created 20 Mar 2026, 11:09:48 UTC
Sent 20 Mar 2026, 17:54:49 UTC
Report deadline 24 Mar 2026, 17:54:49 UTC
Received 21 Mar 2026, 13:40:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 29183
Run time 12 hours 53 min 38 sec
CPU time 12 hours 51 min 33 sec
Validate state Valid
Credit 655.75
Device peak FLOPS 6.91 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.21 MB
Peak swap size 246.80 MB
Peak disk usage 20.29 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:55:16 (5658): wrapper (7.17.26016): starting
13:55:16 (5658): wrapper (7.17.26016): starting
13:55:16 (5658): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (22 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x559698a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f8f336b7520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f8f3370b9fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f8f336b7476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f8f3369d7f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89677)[0x7f8f336fe677]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f8f33715cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f8f33717a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f8f3371a453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x559698a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x559698a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f8f336b7520]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x559698a3aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f8f336b7520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f8f3375a7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f8f3375f677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f8f33790faf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x559698a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x559698a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f8f3369ed90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f8f3369ee40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x559698a1aa3a]

Exiting...
14:15:51 (2404): wrapper (7.17.26016): starting
14:15:52 (2404): wrapper (7.17.26016): starting
14:15:52 (2404): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:40:14 (2404): cmdock exited; CPU time 45561.990145
09:40:14 (2404): called boinc_finish(0)

</stderr_txt>
]]>


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