Task 100242833

Name ebola_RdRp_v1_sidock_00778923_r3_s-24.0_0
Workunit 70657707
Created 20 Mar 2026, 18:48:56 UTC
Sent 23 Mar 2026, 21:31:02 UTC
Report deadline 27 Mar 2026, 21:31:02 UTC
Received 25 Mar 2026, 8:32:28 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 80169
Run time 16 hours 11 min 52 sec
CPU time 13 hours 51 min 7 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 2.06 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.24 MB
Peak swap size 247.24 MB
Peak disk usage 20.12 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
23:31:05 (5511): wrapper (7.17.26016): starting
23:31:06 (5511): wrapper (7.17.26016): starting
23:31:06 (5511): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x63fbdce3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78e436445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x78e4364add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x63fbdce5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x63fbdce7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78e436445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x78e4364ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x78e4364f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x78e43652975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x63fbdce51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x63fbdce1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x78e43642a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x78e43642a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x63fbdce1aa3a]

Exiting...
11:50:06 (113078): wrapper (7.17.26016): starting
11:50:06 (113078): wrapper (7.17.26016): starting
11:50:06 (113078): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:35:53 (29433): wrapper (7.17.26016): starting
18:35:53 (29433): wrapper (7.17.26016): starting
18:35:53 (29433): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:48:13 (3838): wrapper (7.17.26016): starting
19:48:13 (3838): wrapper (7.17.26016): starting
19:48:13 (3838): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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