Task 100245026

Name ebola_RdRp_v1_sidock_00779474_r2_s-24.0_0
Workunit 70659910
Created 20 Mar 2026, 18:50:45 UTC
Sent 23 Mar 2026, 23:29:51 UTC
Report deadline 27 Mar 2026, 23:29:51 UTC
Received 25 Mar 2026, 5:35:14 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 84313
Run time 10 hours 45 min 21 sec
CPU time 10 hours 45 min 4 sec
Validate state Valid
Credit 767.59
Device peak FLOPS 5.80 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.39 MB
Peak swap size 247.84 MB
Peak disk usage 20.25 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:31:29 (434468): wrapper (7.17.26016): starting
23:31:29 (434468): wrapper (7.17.26016): starting
23:31:29 (434468): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x555ff9a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7f3e423da320]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7f3e42442d45]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x555ff9a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x555ff9a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7f3e423da320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7f3e42481adf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f3e4248ea27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7f3e424be72c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x555ff9a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x555ff9a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f3e423bf1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f3e423bf28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x555ff9a1aa3a]

Exiting...
05:08:43 (85801): wrapper (7.17.26016): starting
05:08:44 (85801): wrapper (7.17.26016): starting
05:08:44 (85801): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:35:00 (85801): cmdock exited; CPU time 887.018619
05:35:00 (85801): called boinc_finish(0)

</stderr_txt>
]]>


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