Task 100250943

Name ebola_RdRp_v1_sidock_00760555_r4_s-24.0_1
Workunit 70584236
Created 22 Mar 2026, 6:42:12 UTC
Sent 24 Mar 2026, 5:25:13 UTC
Report deadline 28 Mar 2026, 5:25:13 UTC
Received 25 Mar 2026, 23:05:07 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 84313
Run time 11 hours 5 min 1 sec
CPU time 11 hours 4 min 43 sec
Validate state Valid
Credit 782.41
Device peak FLOPS 5.80 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.10 MB
Peak swap size 247.41 MB
Peak disk usage 20.45 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:34:26 (442351): wrapper (7.17.26016): starting
06:34:26 (442351): wrapper (7.17.26016): starting
06:34:26 (442351): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5568c9e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7f98c1eeb320]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7f98c1f53d45]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5568c9e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5568c9e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7f98c1eeb320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7f98c1f92adf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f98c1f9fa27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7f98c1fcf72c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5568c9e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5568c9e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f98c1ed01ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f98c1ed028b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5568c9e1aa3a]

Exiting...
05:08:43 (85803): wrapper (7.17.26016): starting
05:08:44 (85803): wrapper (7.17.26016): starting
05:08:44 (85803): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:04:59 (85803): cmdock exited; CPU time 27363.251265
23:04:59 (85803): called boinc_finish(0)

</stderr_txt>
]]>


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