Task 100252201

Name	ebola_RdRp_v1_sidock_00749239_r1_s-24.0_1
Workunit	70538969
Created	22 Mar 2026, 21:22:22 UTC
Sent	24 Mar 2026, 6:38:07 UTC
Report deadline	28 Mar 2026, 6:38:07 UTC
Received	26 Mar 2026, 4:30:15 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54582
Run time	12 hours 43 min 4 sec
CPU time	12 hours 42 min 48 sec
Validate state	Valid
Credit	630.26
Device peak FLOPS	8.40 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	241.34 MB
Peak swap size	248.84 MB
Peak disk usage	20.41 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
01:56:56 (686220): wrapper (7.17.26016): starting
01:56:57 (686220): wrapper (7.17.26016): starting
01:56:57 (686220): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6298d663ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x761b54645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x761b5469eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x761b5464527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x761b546288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x761b546297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x761b546a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x761b546ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x761b546addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6298d665c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6298d667b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x761b54645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x761b546ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x761b546f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x761b5472975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6298d6651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6298d661e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x761b5462a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x761b5462a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6298d661aa3a]

Exiting...
21:10:07 (907385): wrapper (7.17.26016): starting
21:10:07 (907385): wrapper (7.17.26016): starting
21:10:07 (907385): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59aeed83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x794c02045330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x794c020add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59aeed85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59aeed87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x794c02045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x794c020ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x794c020f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x794c0212975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x59aeed851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59aeed81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x794c0202a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x794c0202a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59aeed81aa3a]

Exiting...
21:00:02 (1130670): wrapper (7.17.26016): starting
21:00:02 (1130670): wrapper (7.17.26016): starting
21:00:02 (1130670): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:30:02 (1130670): cmdock exited; CPU time 8994.959809
23:30:02 (1130670): called boinc_finish(0)

</stderr_txt>
]]>