Task 100267013

Name ebola_RdRp_v1_sidock_00782886_r1_s-24.0_0
Workunit 70673557
Created 24 Mar 2026, 9:10:08 UTC
Sent 24 Mar 2026, 23:18:38 UTC
Report deadline 28 Mar 2026, 23:18:38 UTC
Received 28 Mar 2026, 8:32:32 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 82447
Run time 1 days 2 hours 24 min 7 sec
CPU time 1 days 1 hours 58 min 32 sec
Validate state Valid
Credit 1,372.89
Device peak FLOPS 3.49 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.00 MB
Peak swap size 248.17 MB
Peak disk usage 20.37 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:59:33 (1633122): wrapper (7.17.26016): starting
06:59:34 (1633122): wrapper (7.17.26016): starting
06:59:34 (1633122): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x62c8ea03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x709b62821df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x709b6287695c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x709b62821cc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x709b6280a4ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x709b6280b291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x709b62880465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x709b6288541c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x62c8ea05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x62c8ea07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x709b62821df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x709b6287c9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x709b62871668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x709b628bdfba]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x709b628c93d3]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x709b628f23b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x62c8ea051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x62c8ea01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x709b6280bca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x709b6280bd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x62c8ea01aa3a]

Exiting...
18:38:39 (1748): wrapper (7.17.26016): starting
18:38:39 (1748): wrapper (7.17.26016): starting
18:38:39 (1748): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:32:21 (1748): cmdock exited; CPU time 52720.664151
09:32:21 (1748): called boinc_finish(0)

</stderr_txt>
]]>


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