Task 100274194

Name ebola_RdRp_v1_sidock_00784680_r2_s-24.0_0
Workunit 70680734
Created 24 Mar 2026, 9:16:31 UTC
Sent 25 Mar 2026, 7:56:54 UTC
Report deadline 29 Mar 2026, 7:56:54 UTC
Received 27 Mar 2026, 0:21:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 84203
Run time 8 hours 55 min 40 sec
CPU time 8 hours 52 min 35 sec
Validate state Valid
Credit 631.82
Device peak FLOPS 7.79 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.30 MB
Peak swap size 247.35 MB
Peak disk usage 20.28 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:06:03 (7165): wrapper (7.17.26016): starting
09:06:03 (7165): wrapper (7.17.26016): starting
09:06:03 (7165): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid size
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55b98d63ff8c]
/lib64/libc.so.6(+0x1a290) [0x7f7568e63290]
/lib64/libc.so.6(+0x743cc) [0x7f7568ebd3cc]
/lib64/libc.so.6(gsignal+0x1e) [0x7f7568e6315e]
/lib64/libc.so.6(abort+0x26) [0x7f7568e4a6d0]
/lib64/libc.so.6(+0x273b) [0x7f7568e4b73b]
/lib64/libc.so.6(+0x7e665) [0x7f7568ec7665]
/lib64/libc.so.6(+0x7e684) [0x7f7568ec7684]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55b98d65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55b98d67b8e4]
/lib64/libc.so.6(+0x1a290) [0x7f7568e63290]
/lib64/libc.so.6(+0x7a9a2) [0x7f7568ec39a2]
/lib64/libc.so.6(+0x6ec3c) [0x7f7568eb7c3c]
/lib64/libc.so.6(clock_nanosleep+0x32) [0x7f7568f07ba2]
/lib64/libc.so.6(nanosleep+0x17) [0x7f7568f13b77]
/lib64/libc.so.6(usleep+0x4a) [0x7f7568f3e17a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55b98d651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55b98d61e784]
/lib64/libc.so.6(+0x35b5) [0x7f7568e4c5b5]
/lib64/libc.so.6(__libc_start_main+0x88) [0x7f7568e4c668]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55b98d61aa3a]

Exiting...
19:59:21 (1484): wrapper (7.17.26016): starting
19:59:21 (1484): wrapper (7.17.26016): starting
19:59:21 (1484): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:20:38 (1483): wrapper (7.17.26016): starting
07:20:38 (1483): wrapper (7.17.26016): starting
07:20:38 (1483): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:14:51 (1480): wrapper (7.17.26016): starting
18:14:51 (1480): wrapper (7.17.26016): starting
18:14:51 (1480): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:53:01 (29143): wrapper (7.17.26016): starting
23:53:01 (29143): wrapper (7.17.26016): starting
23:53:01 (29143): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:21:13 (29143): cmdock exited; CPU time 5240.815323
01:21:13 (29143): called boinc_finish(0)

</stderr_txt>
]]>


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