Task 100286160

Name ebola_RdRp_v1_sidock_00787677_r3_s-24.0_0
Workunit 70692723
Created 24 Mar 2026, 9:27:07 UTC
Sent 25 Mar 2026, 22:24:57 UTC
Report deadline 29 Mar 2026, 22:24:57 UTC
Received 28 Mar 2026, 7:09:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 82444
Run time 1 days 4 hours 52 min 50 sec
CPU time 1 days 4 hours 18 min 5 sec
Validate state Valid
Credit 1,355.36
Device peak FLOPS 3.28 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.80 MB
Peak swap size 247.27 MB
Peak disk usage 20.25 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:09:46 (1265011): wrapper (7.17.26016): starting
03:09:46 (1265011): wrapper (7.17.26016): starting
03:09:46 (1265011): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x56ce0d43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7431f0979df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x7431f09ce95c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x7431f0979cc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x7431f09624ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x7431f0963291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x7431f09d8465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x7431f09dd41c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x56ce0d45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x56ce0d47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7431f0979df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7431f09d49ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7431f09c9668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7431f0a15fba]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7431f0a213d3]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7431f0a4a3b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x56ce0d451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x56ce0d41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7431f0963ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7431f0963d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x56ce0d41aa3a]

Exiting...
18:41:01 (1732): wrapper (7.17.26016): starting
18:41:01 (1732): wrapper (7.17.26016): starting
18:41:01 (1732): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:09:27 (1732): cmdock exited; CPU time 47533.887954
08:09:27 (1732): called boinc_finish(0)

</stderr_txt>
]]>


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