Task 100287073

Name ebola_RdRp_v1_sidock_00787882_r4_s-24.0_0
Workunit 70693544
Created 24 Mar 2026, 9:27:53 UTC
Sent 25 Mar 2026, 23:09:46 UTC
Report deadline 29 Mar 2026, 23:09:46 UTC
Received 28 Mar 2026, 5:45:12 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 82445
Run time 1 days 4 hours 32 min 55 sec
CPU time 1 days 4 hours 2 min 42 sec
Validate state Valid
Credit 1,247.67
Device peak FLOPS 3.47 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.63 MB
Peak swap size 247.71 MB
Peak disk usage 20.40 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:04:00 (4013171): wrapper (7.17.26016): starting
02:04:00 (4013171): wrapper (7.17.26016): starting
02:04:00 (4013171): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x63395683ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x71cd65f66df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x71cd65fbb95c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x71cd65f66cc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x71cd65f4f4ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x71cd65f50291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x71cd65fc5465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x71cd65fca41c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x63395685c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x63395687b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x71cd65f66df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x71cd65fc19ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x71cd65fb6668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x71cd66002fba]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x71cd6600e3d3]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x71cd660373b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x633956851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x63395681e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x71cd65f50ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x71cd65f50d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x63395681aa3a]

Exiting...
18:36:06 (1813): wrapper (7.17.26016): starting
18:36:06 (1813): wrapper (7.17.26016): starting
18:36:06 (1813): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:45:03 (1813): cmdock exited; CPU time 42983.344727
06:45:03 (1813): called boinc_finish(0)

</stderr_txt>
]]>


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