Task 100293178

Name ebola_RdRp_v1_sidock_00789420_r1_s-24.0_0
Workunit 70699693
Created 24 Mar 2026, 9:33:07 UTC
Sent 26 Mar 2026, 6:46:07 UTC
Report deadline 30 Mar 2026, 6:46:07 UTC
Received 28 Mar 2026, 15:27:14 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 82448
Run time 1 days 5 hours 22 min 42 sec
CPU time 1 days 4 hours 54 min 27 sec
Validate state Valid
Credit 1,463.11
Device peak FLOPS 3.49 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.42 MB
Peak swap size 247.59 MB
Peak disk usage 20.40 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:00:10 (3700126): wrapper (7.17.26016): starting
11:00:10 (3700126): wrapper (7.17.26016): starting
11:00:10 (3700126): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x57b6bf03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7d93634ecdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x7d936354195c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x7d93634eccc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x7d93634d54ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x7d93634d6291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x7d936354b465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x7d936355041c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x57b6bf05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x57b6bf07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7d93634ecdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7d93635479ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7d936353c668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7d9363588fba]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7d93635943d3]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7d93635bd3b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x57b6bf051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x57b6bf01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7d93634d6ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7d93634d6d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x57b6bf01aa3a]

Exiting...
18:38:48 (1725): wrapper (7.17.26016): starting
18:38:48 (1725): wrapper (7.17.26016): starting
18:38:48 (1725): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:27:04 (1725): cmdock exited; CPU time 77082.892199
16:27:04 (1725): called boinc_finish(0)

</stderr_txt>
]]>


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