Task 100301340

Name	ebola_RdRp_v1_sidock_00791459_r2_s-24.0_0
Workunit	70707850
Created	24 Mar 2026, 9:40:15 UTC
Sent	26 Mar 2026, 17:01:15 UTC
Report deadline	30 Mar 2026, 17:01:15 UTC
Received	26 Mar 2026, 22:28:02 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	81712
Run time	5 hours 20 min 17 sec
CPU time	5 hours 20 min 10 sec
Validate state	Valid
Credit	558.18
Device peak FLOPS	11.68 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	242.00 MB
Peak swap size	248.78 MB
Peak disk usage	20.34 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:02:17 (27256): wrapper (7.17.26016): starting
11:02:17 (27256): wrapper (7.17.26016): starting
11:02:17 (27256): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57e92563ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76ed71245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x76ed7129eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x76ed7124527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x76ed712288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x76ed712297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x76ed712a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x76ed712ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x76ed712addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57e92565c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57e92567b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76ed71245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76ed712ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76ed712f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76ed7132975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57e925651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57e92561e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76ed7122a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76ed7122a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57e92561aa3a]

Exiting...
13:21:54 (2876): wrapper (7.17.26016): starting
13:21:54 (2876): wrapper (7.17.26016): starting
13:21:54 (2876): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5bcd09e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75d3f0e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75d3f0e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75d3f0e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x75d3f0e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x75d3f0e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x75d3f0ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x75d3f0eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x75d3f0eaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5bcd09e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5bcd09e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75d3f0e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75d3f0eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75d3f0ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75d3f0f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5bcd09e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5bcd09e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75d3f0e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75d3f0e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5bcd09e1aa3a]

Exiting...
13:29:44 (2880): wrapper (7.17.26016): starting
13:29:44 (2880): wrapper (7.17.26016): starting
13:29:44 (2880): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:27:50 (2880): cmdock exited; CPU time 10684.038941
16:27:50 (2880): called boinc_finish(0)

</stderr_txt>
]]>