Task 100310718

Name ebola_RdRp_v1_sidock_00793798_r1_s-24.0_0
Workunit 70717205
Created 24 Mar 2026, 9:48:27 UTC
Sent 27 Mar 2026, 4:43:34 UTC
Report deadline 31 Mar 2026, 4:43:34 UTC
Received 27 Mar 2026, 21:35:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 70595
Run time 3 hours 52 min 21 sec
CPU time 3 hours 52 min 18 sec
Validate state Valid
Credit 558.64
Device peak FLOPS 8.66 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.10 MB
Peak swap size 247.14 MB
Peak disk usage 20.19 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:20:24 (60397): wrapper (7.17.26016): starting
00:20:24 (60397): wrapper (7.17.26016): starting
00:20:24 (60397): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5b1f27a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7726b0045f60]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x17) [0x7726b00b5d27]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5b1f27a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5b1f27a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7726b0045f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x7726b00ac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x7726b00a00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x7726b00f6372]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x7726b0104057]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x7726b0136f6a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5b1f27a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5b1f27a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x7726b002a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x7726b002a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5b1f27a1aa3a]

Exiting...
04:39:16 (2697): wrapper (7.17.26016): starting
04:39:16 (2697): wrapper (7.17.26016): starting
04:39:16 (2697): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:33:56 (2697): cmdock exited; CPU time 10471.923559
13:33:56 (2697): called boinc_finish(0)

</stderr_txt>
]]>


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