Task 100310970

Name ebola_RdRp_v1_sidock_00793857_r2_s-24.0_0
Workunit 70717442
Created 24 Mar 2026, 9:48:38 UTC
Sent 27 Mar 2026, 5:05:54 UTC
Report deadline 31 Mar 2026, 5:05:54 UTC
Received 27 Mar 2026, 21:35:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 70595
Run time 3 hours 27 min 7 sec
CPU time 3 hours 27 min 3 sec
Validate state Valid
Credit 499.63
Device peak FLOPS 8.66 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.06 MB
Peak swap size 248.21 MB
Peak disk usage 20.39 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:45:59 (60767): wrapper (7.17.26016): starting
00:45:59 (60767): wrapper (7.17.26016): starting
00:45:59 (60767): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5b819aa3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x784a7e445f60]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x17) [0x784a7e4b5d27]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5b819aa5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5b819aa7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x784a7e445f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x784a7e4ac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x784a7e4a00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x784a7e4f6372]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x784a7e504057]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x784a7e536f6a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5b819aa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5b819aa1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x784a7e42a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x784a7e42a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5b819aa1aa3a]

Exiting...
04:39:16 (2698): wrapper (7.17.26016): starting
04:39:16 (2698): wrapper (7.17.26016): starting
04:39:16 (2698): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:13:18 (2698): cmdock exited; CPU time 12832.684976
14:13:18 (2698): called boinc_finish(0)

</stderr_txt>
]]>


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