Task 100311054

Name ebola_RdRp_v1_sidock_00793878_r2_s-24.0_0
Workunit 70717526
Created 24 Mar 2026, 9:48:42 UTC
Sent 27 Mar 2026, 5:15:05 UTC
Report deadline 31 Mar 2026, 5:15:05 UTC
Received 29 Mar 2026, 7:19:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 44646
Run time 1 days 1 hours 55 min 54 sec
CPU time 1 days 1 hours 51 min 13 sec
Validate state Valid
Credit 581.15
Device peak FLOPS 4.31 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.37 MB
Peak swap size 247.24 MB
Peak disk usage 20.46 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:18:35 (6384): wrapper (7.17.26016): starting
06:18:35 (6384): wrapper (7.17.26016): starting
06:18:35 (6384): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d729843ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f3578a45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7f3578aadd75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d729845c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d729847b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f3578a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7f3578aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f3578af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7f3578b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d7298451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d729841e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f3578a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f3578a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d729841aa3a]

Exiting...
15:54:50 (2649): wrapper (7.17.26016): starting
15:54:50 (2649): wrapper (7.17.26016): starting
15:54:50 (2649): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:03:04 (11147): wrapper (7.17.26016): starting
02:03:05 (11147): wrapper (7.17.26016): starting
02:03:05 (11147): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:37:10 (16394): wrapper (7.17.26016): starting
16:37:10 (16394): wrapper (7.17.26016): starting
16:37:10 (16394): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:20:16 (18002): wrapper (7.17.26016): starting
21:20:17 (18002): wrapper (7.17.26016): starting
21:20:17 (18002): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:15:26 (19085): wrapper (7.17.26016): starting
00:15:26 (19085): wrapper (7.17.26016): starting
00:15:26 (19085): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:19:38 (19085): cmdock exited; CPU time 10862.854192
03:19:38 (19085): called boinc_finish(0)

</stderr_txt>
]]>


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