Task 100311617

Name ebola_RdRp_v1_sidock_00794018_r4_s-24.0_0
Workunit 70718088
Created 24 Mar 2026, 9:49:14 UTC
Sent 27 Mar 2026, 5:59:17 UTC
Report deadline 31 Mar 2026, 5:59:17 UTC
Received 27 Mar 2026, 21:35:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 70595
Run time 2 hours 54 min
CPU time 2 hours 53 min 54 sec
Validate state Valid
Credit 418.42
Device peak FLOPS 8.66 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.73 MB
Peak swap size 246.71 MB
Peak disk usage 20.20 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:19:45 (61244): wrapper (7.17.26016): starting
01:19:45 (61244): wrapper (7.17.26016): starting
01:19:45 (61244): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x6184d0a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7a9586845f60]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x17) [0x7a95868b5d27]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x6184d0a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x6184d0a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7a9586845f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x7a95868ac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x7a95868a00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x7a95868f6372]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x7a9586904057]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x7a9586936f6a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x6184d0a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x6184d0a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x7a958682a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x7a958682a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x6184d0a1aa3a]

Exiting...
04:39:16 (2701): wrapper (7.17.26016): starting
04:39:16 (2701): wrapper (7.17.26016): starting
04:39:16 (2701): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:20:30 (2701): cmdock exited; CPU time 13264.798252
14:20:30 (2701): called boinc_finish(0)

</stderr_txt>
]]>


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