Task 100312137

Name	ebola_RdRp_v1_sidock_00794152_r1_s-24.0_0
Workunit	70718621
Created	24 Mar 2026, 9:49:37 UTC
Sent	27 Mar 2026, 6:38:15 UTC
Report deadline	31 Mar 2026, 6:38:15 UTC
Received	29 Mar 2026, 3:48:16 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	8 hours 50 min 26 sec
CPU time	8 hours 50 min 14 sec
Validate state	Valid
Credit	575.18
Device peak FLOPS	9.84 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.00 MB
Peak swap size	246.88 MB
Peak disk usage	20.22 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:25:04 (1091831): wrapper (7.17.26016): starting
04:25:04 (1091831): wrapper (7.17.26016): starting
04:25:04 (1091831): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d8d2be3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f4b9bc45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7f4b9bc9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7f4b9bc4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7f4b9bc288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7f4b9bc297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7f4b9bca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7f4b9bcab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7f4b9bcaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d8d2be5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d8d2be7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f4b9bc45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7f4b9bcecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f4b9bcf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7f4b9bd2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d8d2be51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d8d2be1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f4b9bc2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f4b9bc2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d8d2be1aa3a]

Exiting...
00:06:54 (1240586): wrapper (7.17.26016): starting
00:06:54 (1240586): wrapper (7.17.26016): starting
00:06:54 (1240586): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ec46b83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x767d14e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x767d14e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x767d14e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x767d14e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x767d14e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x767d14ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x767d14eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x767d14eaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ec46b85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ec46b87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x767d14e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x767d14eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x767d14ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x767d14f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ec46b851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ec46b81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x767d14e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x767d14e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ec46b81aa3a]

Exiting...
21:14:55 (2678): wrapper (7.17.26016): starting
21:14:55 (2678): wrapper (7.17.26016): starting
21:14:55 (2678): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:48:06 (2678): cmdock exited; CPU time 5589.778517
22:48:06 (2678): called boinc_finish(0)

</stderr_txt>
]]>