Task 100313405

Name ebola_RdRp_v1_sidock_00794467_r1_s-24.0_0
Workunit 70719881
Created 24 Mar 2026, 9:50:46 UTC
Sent 27 Mar 2026, 8:20:23 UTC
Report deadline 31 Mar 2026, 8:20:23 UTC
Received 29 Mar 2026, 8:20:07 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 44646
Run time 1 days 2 hours 12 min 56 sec
CPU time 1 days 2 hours 8 min 2 sec
Validate state Valid
Credit 594.15
Device peak FLOPS 4.31 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.13 MB
Peak swap size 247.10 MB
Peak disk usage 20.18 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:30:11 (6447): wrapper (7.17.26016): starting
06:30:11 (6447): wrapper (7.17.26016): starting
06:30:11 (6447): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a2678e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x761f6be45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x761f6beadd75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a2678e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a2678e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x761f6be45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x761f6beecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x761f6bef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x761f6bf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5a2678e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5a2678e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x761f6be2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x761f6be2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a2678e1aa3a]

Exiting...
15:54:50 (2650): wrapper (7.17.26016): starting
15:54:50 (2650): wrapper (7.17.26016): starting
15:54:50 (2650): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:08:16 (11171): wrapper (7.17.26016): starting
02:08:17 (11171): wrapper (7.17.26016): starting
02:08:17 (11171): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:39:20 (16413): wrapper (7.17.26016): starting
16:39:20 (16413): wrapper (7.17.26016): starting
16:39:20 (16413): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:21:11 (18010): wrapper (7.17.26016): starting
21:21:11 (18010): wrapper (7.17.26016): starting
21:21:11 (18010): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:41:02 (19212): wrapper (7.17.26016): starting
00:41:02 (19212): wrapper (7.17.26016): starting
00:41:02 (19212): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:19:54 (19212): cmdock exited; CPU time 12887.701372
04:19:54 (19212): called boinc_finish(0)

</stderr_txt>
]]>


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