Task 100317045

Name ebola_RdRp_v1_sidock_00795376_r3_s-24.0_0
Workunit 70723519
Created 24 Mar 2026, 9:53:51 UTC
Sent 27 Mar 2026, 12:11:01 UTC
Report deadline 31 Mar 2026, 12:11:01 UTC
Received 29 Mar 2026, 1:07:20 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 69266
Run time 10 hours 3 min 18 sec
CPU time 10 hours 1 min 39 sec
Validate state Valid
Credit 584.21
Device peak FLOPS 7.49 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.23 MB
Peak swap size 247.13 MB
Peak disk usage 20.26 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:10:20 (926419): wrapper (7.17.26016): starting
00:10:20 (926419): wrapper (7.17.26016): starting
00:10:20 (926419): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/boinc/BOINC/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid size
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55873183ff8c]
/lib64/libc.so.6(+0x42910) [0x7fc3c2a42910]
/lib64/libc.so.6(+0x9dd3c) [0x7fc3c2a9dd3c]
/lib64/libc.so.6(gsignal+0x18) [0x7fc3c2a427b6]
/lib64/libc.so.6(abort+0x2a) [0x7fc3c2a2934b]
/lib64/libc.so.6(+0x2a3ad) [0x7fc3c2a2a3ad]
/lib64/libc.so.6(+0xa8b77) [0x7fc3c2aa8b77]
/lib64/libc.so.6(+0xa8ba1) [0x7fc3c2aa8ba1]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55873185c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55873187b8e4]
/lib64/libc.so.6(+0x42910) [0x7fc3c2a42910]
/lib64/libc.so.6(+0xa4812) [0x7fc3c2aa4812]
/lib64/libc.so.6(+0x98008) [0x7fc3c2a98008]
/lib64/libc.so.6(clock_nanosleep+0x30) [0x7fc3c2ae8fbe]
/lib64/libc.so.6(nanosleep+0x19) [0x7fc3c2af4fe7]
/lib64/libc.so.6(usleep+0x49) [0x7fc3c2b20717]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x558731851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55873181e784]
/lib64/libc.so.6(+0x2b2fb) [0x7fc3c2a2b2fb]
/lib64/libc.so.6(__libc_start_main+0x8d) [0x7fc3c2a2b3cb]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55873181aa3a]

Exiting...
19:04:42 (41954): wrapper (7.17.26016): starting
19:04:42 (41954): wrapper (7.17.26016): starting
19:04:42 (41954): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/boinc/BOINC/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:07:06 (41954): cmdock exited; CPU time 25242.341218
03:07:06 (41954): called boinc_finish(0)

</stderr_txt>
]]>


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