Task 100365558

Name ebola_RdRp_v1_sidock_00804453_r3_s-24.0_0
Workunit 70759827
Created 28 Mar 2026, 19:25:33 UTC
Sent 29 Mar 2026, 12:56:34 UTC
Report deadline 2 Apr 2026, 12:56:34 UTC
Received 30 Mar 2026, 12:37:15 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83300
Run time 17 hours 45 min 46 sec
CPU time 17 hours 2 min 19 sec
Validate state Valid
Credit 439.32
Device peak FLOPS 6.07 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 236.85 MB
Peak swap size 244.03 MB
Peak disk usage 20.41 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:56:39 (2458): wrapper (7.17.26016): starting
08:56:39 (2458): wrapper (7.17.26016): starting
08:56:39 (2458): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/stwisdale/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
double free or corruption (top)
SIGABRT: abort called
Stack trace (19 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x563b6403ff8c]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x415c0) [0x7faee2e5c5c0]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x9a344) [0x7faee2eb5344]
/usr/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e) [0x7faee2e5c50e]
/usr/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf) [0x7faee2e43882]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x298f6) [0x7faee2e448f6]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0xa4765) [0x7faee2ebf765]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0xa68bc) [0x7faee2ec18bc]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0xa6c02) [0x7faee2ec1c02]
/usr/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e) [0x7faee2ec447e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8ec) [0x563b6407b8ec]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x415c0) [0x7faee2e5c5c0]
/usr/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x63) [0x7faee2f001e3]
/usr/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x7faee2f0c367]
/usr/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x7faee2f37a5a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x563b64051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd) [0x563b6403cdcd]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x98261) [0x7faee2eb3261]
/usr/lib/x86_64-linux-gnu/libc.so.6(__clone+0x44) [0x7faee2f37d54]

Exiting...
06:00:26 (141): wrapper (7.17.26016): starting
06:00:26 (141): wrapper (7.17.26016): starting
06:00:26 (141): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/stwisdale/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:37:01 (141): cmdock exited; CPU time 9006.994065
08:37:01 (141): called boinc_finish(0)

</stderr_txt>
]]>


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