Task 100390031

Name ebola_RdRp_v1_sidock_00810571_r3_s-24.0_0
Workunit 70784299
Created 28 Mar 2026, 19:46:37 UTC
Sent 30 Mar 2026, 19:32:19 UTC
Report deadline 3 Apr 2026, 19:32:19 UTC
Received 1 Apr 2026, 23:12:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 80356
Run time 21 hours 44 min 43 sec
CPU time 21 hours 33 min 23 sec
Validate state Valid
Credit 578.77
Device peak FLOPS 4.22 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.00 MB
Peak swap size 246.23 MB
Peak disk usage 20.34 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:22:53 (477891): wrapper (7.17.26016): starting
02:22:54 (477891): wrapper (7.17.26016): starting
02:22:54 (477891): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ffdce83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75cd3c645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75cd3c69eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75cd3c64527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x75cd3c6288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x75cd3c6297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x75cd3c6a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x75cd3c6ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x75cd3c6addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ffdce85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ffdce87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75cd3c645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75cd3c6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75cd3c6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75cd3c72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ffdce851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ffdce81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75cd3c62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75cd3c62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ffdce81aa3a]

Exiting...
08:28:16 (492345): wrapper (7.17.26016): starting
08:28:16 (492345): wrapper (7.17.26016): starting
08:28:16 (492345): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:11:55 (492345): cmdock exited; CPU time 56025.871202
00:11:56 (492345): called boinc_finish(0)

</stderr_txt>
]]>


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