Task 100413710

Name ebola_RdRp_v1_sidock_00816486_r2_s-24.0_0
Workunit 70807958
Created 28 Mar 2026, 20:07:03 UTC
Sent 31 Mar 2026, 23:08:01 UTC
Report deadline 4 Apr 2026, 23:08:01 UTC
Received 6 Apr 2026, 0:50:02 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 65913
Run time 16 hours 42 min 4 sec
CPU time 16 hours 41 min 46 sec
Validate state Valid
Credit 615.35
Device peak FLOPS 2.73 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.43 MB
Peak swap size 247.77 MB
Peak disk usage 20.37 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
17:35:59 (13791): wrapper (7.17.26016): starting
17:36:00 (13791): wrapper (7.17.26016): starting
17:36:00 (13791): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f422c43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fd664645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7fd6646add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f422c45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f422c47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fd664645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7fd6646ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fd6646f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7fd66472975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f422c451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f422c41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7fd66462a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7fd66462a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f422c41aa3a]

Exiting...
07:15:51 (7019): wrapper (7.17.26016): starting
07:15:51 (7019): wrapper (7.17.26016): starting
07:15:51 (7019): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:20:04 (5587): wrapper (7.17.26016): starting
07:20:04 (5587): wrapper (7.17.26016): starting
07:20:04 (5587): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:49:51 (5587): cmdock exited; CPU time 44894.043474
19:49:51 (5587): called boinc_finish(0)

</stderr_txt>
]]>


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