Task 81475457
| Name | corona_RdRp_v2_sidock_01586723_r2_s-20_0 |
| Workunit | 52990505 |
| Created | 11 Apr 2024, 8:32:40 UTC |
| Sent | 13 Apr 2024, 2:16:37 UTC |
| Report deadline | 19 Apr 2024, 2:16:37 UTC |
| Received | 5 May 2024, 0:12:51 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 40491 |
| Run time | 6 days 21 hours 40 min 25 sec |
| CPU time | 6 days 20 hours 36 min 16 sec |
| Validate state | Task was reported too late to validate |
| Credit | 0.00 |
| Device peak FLOPS | 1.80 GFLOPS |
| Application version | CurieMarieDock 0.2.0 long tasks v2.02 arm-unknown-linux-gnueabihf |
| Peak working set size | 103.66 MB |
| Peak swap size | 105.02 MB |
| Peak disk usage | 18.03 MB |
Stderr output
<core_client_version>7.18.1</core_client_version> <![CDATA[ <stderr_txt> 05:18:31 (23914): wrapper (7.17.26016): starting 05:18:32 (23914): wrapper (7.17.26016): starting 05:18:32 (23914): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6e0d6e0] Exiting... 00:15:00 (29154): wrapper (7.17.26016): starting 00:15:01 (29154): wrapper (7.17.26016): starting 00:15:01 (29154): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6dad6e0] Exiting... 00:15:00 (17413): wrapper (7.17.26016): starting 00:15:01 (17413): wrapper (7.17.26016): starting 00:15:01 (17413): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6ddd6e0] Exiting... 00:15:00 (4995): wrapper (7.17.26016): starting 00:15:01 (4995): wrapper (7.17.26016): starting 00:15:01 (4995): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d9d6e0] Exiting... 00:15:00 (25550): wrapper (7.17.26016): starting 00:15:01 (25550): wrapper (7.17.26016): starting 00:15:01 (25550): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6dad6e0] Exiting... 00:15:00 (12270): wrapper (7.17.26016): starting 00:15:01 (12270): wrapper (7.17.26016): starting 00:15:01 (12270): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d5d6e0] Exiting... 00:15:00 (3513): wrapper (7.17.26016): starting 00:15:01 (3513): wrapper (7.17.26016): starting 00:15:01 (3513): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d7d6e0] Exiting... 00:15:00 (23965): wrapper (7.17.26016): starting 00:15:01 (23965): wrapper (7.17.26016): starting 00:15:01 (23965): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d4d6e0] Exiting... 00:15:00 (4939): wrapper (7.17.26016): starting 00:15:01 (4939): wrapper (7.17.26016): starting 00:15:01 (4939): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d5d6e0] Exiting... 00:15:00 (21293): wrapper (7.17.26016): starting 00:15:00 (21293): wrapper (7.17.26016): starting 00:15:00 (21293): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6dfd6e0] Exiting... 00:15:00 (8267): wrapper (7.17.26016): starting 00:15:01 (8267): wrapper (7.17.26016): starting 00:15:01 (8267): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d4d6e0] Exiting... 00:15:00 (28465): wrapper (7.17.26016): starting 00:15:01 (28465): wrapper (7.17.26016): starting 00:15:01 (28465): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6e0d6e0] Exiting... 00:15:00 (9825): wrapper (7.17.26016): starting 00:15:00 (9825): wrapper (7.17.26016): starting 00:15:00 (9825): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6dcd6e0] Exiting... 00:15:00 (26200): wrapper (7.17.26016): starting 00:15:01 (26200): wrapper (7.17.26016): starting 00:15:01 (26200): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6dcd6e0] Exiting... 00:15:00 (13363): wrapper (7.17.26016): starting 00:15:00 (13363): wrapper (7.17.26016): starting 00:15:00 (13363): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d9d6e0] Exiting... 00:15:00 (1261): wrapper (7.17.26016): starting 00:15:00 (1261): wrapper (7.17.26016): starting 00:15:00 (1261): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d9d6e0] Exiting... 00:15:00 (22207): wrapper (7.17.26016): starting 00:15:01 (22207): wrapper (7.17.26016): starting 00:15:01 (22207): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d4d6e0] Exiting... 00:15:00 (9181): wrapper (7.17.26016): starting 00:15:00 (9181): wrapper (7.17.26016): starting 00:15:00 (9181): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6dfd6e0] Exiting... 00:15:00 (28937): wrapper (7.17.26016): starting 00:15:00 (28937): wrapper (7.17.26016): starting 00:15:00 (28937): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d5d6e0] Exiting... 00:15:00 (15727): wrapper (7.17.26016): starting 00:15:01 (15727): wrapper (7.17.26016): starting 00:15:01 (15727): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d2d6e0] Exiting... 00:15:00 (4122): wrapper (7.17.26016): starting 00:15:01 (4122): wrapper (7.17.26016): starting 00:15:01 (4122): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d3d6e0] Exiting... 00:15:00 (24678): wrapper (7.17.26016): starting 00:15:00 (24678): wrapper (7.17.26016): starting 00:15:00 (24678): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (2 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_arm-unknown-linux-gnueabihf[0x39c6c] /lib/arm-linux-gnueabihf/libc.so.6(+0x2d6e0)[0xb6d4d6e0] Exiting... 00:15:00 (24883): wrapper (7.17.26016): starting 00:15:01 (24883): wrapper (7.17.26016): starting 00:15:01 (24883): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 02:12:35 (24883): cmdock exited; CPU time 6986.936332 02:12:35 (24883): called boinc_finish(0) </stderr_txt> ]]>
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