Task 81487634

Name corona_RdRp_v2_sidock_01592812_r1_s-20_0
Workunit 53002682
Created 11 Apr 2024, 8:43:59 UTC
Sent 15 Apr 2024, 8:44:01 UTC
Report deadline 21 Apr 2024, 8:44:01 UTC
Received 19 Apr 2024, 10:33:58 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 43037
Run time 1 days 0 hours 36 min 33 sec
CPU time 1 days 0 hours 33 min 14 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5.21 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 194.34 MB
Peak swap size 200.26 MB
Peak disk usage 20.31 MB

Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
09:10:00 (1372474): wrapper (7.17.26016): starting
09:10:00 (1372474): wrapper (7.17.26016): starting
09:10:00 (1372474): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x564688e3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x13140)[0x7f9bda009140]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f9bd9e5ace1]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f9bd9e44537]
/lib/x86_64-linux-gnu/libc.so.6(+0x7a3a8)[0x7f9bd9e9c3a8]
/lib/x86_64-linux-gnu/libc.so.6(+0x8169a)[0x7f9bd9ea369a]
/lib/x86_64-linux-gnu/libc.so.6(+0x82854)[0x7f9bd9ea4854]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x564688e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x564688e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x38d60)[0x7f9bd9e5ad60]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x81)[0x7f9bd9ee41a1]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f9bd9ee9983]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f9bd9f14695]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x564688e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x564688e1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f9bd9e45d0a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x564688e1aa3a]

Exiting...
11:00:43 (1598): wrapper (7.17.26016): starting
11:00:43 (1598): wrapper (7.17.26016): starting
11:00:43 (1598): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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