Task 81488744

Name corona_RdRp_v2_sidock_01593374_r1_s-20_0
Workunit 53003806
Created 11 Apr 2024, 8:45:00 UTC
Sent 15 Apr 2024, 10:32:44 UTC
Report deadline 21 Apr 2024, 10:32:44 UTC
Received 19 Apr 2024, 10:33:58 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 43037
Run time 22 hours 48 min 54 sec
CPU time 22 hours 46 min 19 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5.21 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 193.64 MB
Peak swap size 199.35 MB
Peak disk usage 20.40 MB

Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
10:58:37 (1376330): wrapper (7.17.26016): starting
10:58:38 (1376330): wrapper (7.17.26016): starting
10:58:38 (1376330): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55c55823ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x13140)[0x7f68ed8e2140]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f68ed733ce1]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f68ed71d537]
/lib/x86_64-linux-gnu/libc.so.6(+0x7a3a8)[0x7f68ed7753a8]
/lib/x86_64-linux-gnu/libc.so.6(+0x8169a)[0x7f68ed77c69a]
/lib/x86_64-linux-gnu/libc.so.6(+0x82854)[0x7f68ed77d854]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55c55825c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55c55827b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x38d60)[0x7f68ed733d60]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x81)[0x7f68ed7bd1a1]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f68ed7c2983]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f68ed7ed695]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55c558251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55c55821e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f68ed71ed0a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55c55821aa3a]

Exiting...
11:00:43 (1601): wrapper (7.17.26016): starting
11:00:43 (1601): wrapper (7.17.26016): starting
11:00:43 (1601): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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