Task 81562811

Name	corona_RdRp_v2_sidock_01613631_r1_s-20_0
Workunit	53064316
Created	18 Apr 2024, 22:05:14 UTC
Sent	22 Apr 2024, 11:01:55 UTC
Report deadline	28 Apr 2024, 11:01:55 UTC
Received	2 May 2024, 23:17:54 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	40165
Run time	9 days 14 hours 7 min 28 sec
CPU time	1 days 18 hours 25 min 33 sec
Validate state	Task was reported too late to validate
Credit	0.00
Device peak FLOPS	4.88 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	194.09 MB
Peak swap size	201.21 MB
Peak disk usage	20.79 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
21:46:58 (56223): wrapper (7.17.26016): starting
21:46:58 (56223): wrapper (7.17.26016): starting
21:46:58 (56223): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
double free or corruption (top)
SIGABRT: abort called
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55bb9aa3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fc5981ca420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fc59800700b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fc597fe6859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7fc59805126e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7fc5980592fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96f7c)[0x7fc59805af7c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8ec)[0x55bb9aa7b8ec]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fc598007090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fc5980a123f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fc5980a6ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fc5980d985f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55bb9aa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55bb9aa1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fc597fe8083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55bb9aa1aa3a]

Exiting...
22:28:20 (531): wrapper (7.17.26016): starting
22:28:21 (531): wrapper (7.17.26016): starting
22:28:21 (531): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:53:18 (11878): wrapper (7.17.26016): starting
20:53:19 (11878): wrapper (7.17.26016): starting
20:53:19 (11878): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:56:11 (11881): wrapper (7.17.26016): starting
20:56:12 (11881): wrapper (7.17.26016): starting
20:56:12 (11881): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
double free or corruption (top)
SIGABRT: abort called
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64009c43ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7c204c418420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7c204c25500b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7c204c234859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7c204c29f26e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7c204c2a72fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96f7c)[0x7c204c2a8f7c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8ec)[0x64009c47b8ec]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7c204c255090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7c204c2ef23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c204c2f4ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7c204c327a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64009c451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64009c41e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7c204c236083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64009c41aa3a]

Exiting...
22:44:26 (932): wrapper (7.17.26016): starting
22:44:26 (932): wrapper (7.17.26016): starting
22:44:26 (932): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
double free or corruption (top)
SIGABRT: abort called
22:47:06 (619): wrapper (7.17.26016): starting
22:47:06 (619): wrapper (7.17.26016): starting
22:47:06 (619): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:17:36 (619): cmdock exited; CPU time 70158.296328
08:17:36 (619): called boinc_finish(0)

</stderr_txt>
]]>