Task 81570366

Name	corona_RdRp_v2_sidock_01617400_r2_s-20_0
Workunit	53071855
Created	18 Apr 2024, 22:12:09 UTC
Sent	23 Apr 2024, 7:54:40 UTC
Report deadline	29 Apr 2024, 7:54:40 UTC
Received	29 Apr 2024, 8:43:46 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	25024
Run time	1 days 2 hours 21 min 8 sec
CPU time	1 days 2 hours 13 min 8 sec
Validate state	Valid
Credit	1,295.35
Device peak FLOPS	8.15 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	192.94 MB
Peak swap size	200.28 MB
Peak disk usage	20.47 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:54:44 (14805): wrapper (7.17.26016): starting
10:54:44 (14805): wrapper (7.17.26016): starting
10:54:44 (14805): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/data/BOINC/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:10:42 (30412): wrapper (7.17.26016): starting
01:10:43 (30412): wrapper (7.17.26016): starting
01:10:43 (30412): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/data/BOINC/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55ff0a63ff8c]
/lib64/libc.so.6(+0x41240)[0x7f6642241240]
/lib64/libc.so.6(+0x949ec)[0x7f66422949ec]
/lib64/libc.so.6(gsignal+0x18)[0x7f6642241176]
/lib64/libc.so.6(abort+0xd9)[0x7f6642228917]
/lib64/libc.so.6(+0x297e8)[0x7f66422297e8]
/lib64/libc.so.6(+0x9f3c7)[0x7f664229f3c7]
/lib64/libc.so.6(+0xa17e4)[0x7f66422a17e4]
/lib64/libc.so.6(__libc_free+0x75)[0x7f66422a4143]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55ff0a65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55ff0a67b8e4]
/lib64/libc.so.6(+0x41240)[0x7f6642241240]
/lib64/libc.so.6(clock_nanosleep+0x67)[0x7f66422dd5b5]
/lib64/libc.so.6(nanosleep+0x19)[0x7f66422e8be7]
/lib64/libc.so.6(usleep+0x4b)[0x7f6642313a49]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55ff0a651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55ff0a61e784]
/lib64/libc.so.6(+0x2a1f0)[0x7f664222a1f0]
/lib64/libc.so.6(__libc_start_main+0x8b)[0x7f664222a2b9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55ff0a61aa3a]

Exiting...
10:29:48 (2999): wrapper (7.17.26016): starting
10:29:50 (2999): wrapper (7.17.26016): starting
10:29:50 (2999): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/data/BOINC/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:43:32 (2999): cmdock exited; CPU time 4411.359628
11:43:32 (2999): called boinc_finish(0)

</stderr_txt>
]]>