Task 81604795

Name	corona_RdRp_v2_sidock_01630840_r2_s-20_0
Workunit	53098735
Created	24 Apr 2024, 21:45:34 UTC
Sent	28 Apr 2024, 15:19:25 UTC
Report deadline	4 May 2024, 15:19:25 UTC
Received	28 Apr 2024, 18:07:28 UTC
Server state	Over
Outcome	Computation error
Client state	Aborted by user
Exit status	203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID	55116
Run time	1 hours 22 min 49 sec
CPU time	1 hours 22 min 41 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	3.25 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	190.83 MB
Peak swap size	197.84 MB
Peak disk usage	19.87 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
11:21:21 (41460): wrapper (7.17.26016): starting
11:21:21 (41460): wrapper (7.17.26016): starting
11:21:21 (41460): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f24b063ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x7216d6242990]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7216d62a881e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f24b065c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f24b067b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x7216d6242990]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc1)[0x7216d62e5771]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7216d62f99b7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x49)[0x7216d6328159]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f24b0651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f24b061e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x28150)[0x7216d6228150]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x89)[0x7216d6228209]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f24b061aa3a]

Exiting...
12:46:41 (2049): wrapper (7.17.26016): starting
12:46:42 (2049): wrapper (7.17.26016): starting
12:46:42 (2049): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5fac54e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x78e0ada42990]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x78e0adaa881e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5fac54e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5fac54e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x78e0ada42990]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc1)[0x78e0adae5771]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x78e0adaf99b7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x49)[0x78e0adb28159]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5fac54e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5fac54e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x28150)[0x78e0ada28150]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x89)[0x78e0ada28209]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5fac54e1aa3a]

Exiting...
12:48:51 (3566): wrapper (7.17.26016): starting
12:48:52 (3566): wrapper (7.17.26016): starting
12:48:52 (3566): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>