Task 81604797

Name	corona_RdRp_v2_sidock_01630841_r2_s-20_0
Workunit	53098737
Created	24 Apr 2024, 21:45:34 UTC
Sent	28 Apr 2024, 15:19:25 UTC
Report deadline	4 May 2024, 15:19:25 UTC
Received	28 Apr 2024, 18:07:28 UTC
Server state	Over
Outcome	Computation error
Client state	Aborted by user
Exit status	203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID	55116
Run time	1 min 15 sec
CPU time	1 min 10 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	3.25 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	185.08 MB
Peak swap size	192.25 MB
Peak disk usage	19.92 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
12:34:50 (43027): wrapper (7.17.26016): starting
12:34:51 (43027): wrapper (7.17.26016): starting
12:34:51 (43027): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a8126a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x72d8bb842990]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x72d8bb8a881e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a8126a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a8126a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x72d8bb842990]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc1)[0x72d8bb8e5771]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x72d8bb8f99b7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x49)[0x72d8bb928159]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5a8126a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5a8126a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x28150)[0x72d8bb828150]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x89)[0x72d8bb828209]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a8126a1aa3a]

Exiting...
12:46:42 (2054): wrapper (7.17.26016): starting
12:46:42 (2054): wrapper (7.17.26016): starting
12:46:42 (2054): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x635bb903ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x7c6a84a42990]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7c6a84aa881e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x635bb905c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x635bb907b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x7c6a84a42990]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc1)[0x7c6a84ae5771]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7c6a84af99b7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x49)[0x7c6a84b28159]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x635bb9051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x635bb901e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x28150)[0x7c6a84a28150]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x89)[0x7c6a84a28209]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x635bb901aa3a]

Exiting...
12:48:51 (3571): wrapper (7.17.26016): starting
12:48:52 (3571): wrapper (7.17.26016): starting
12:48:52 (3571): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>