Task 81656855

Name corona_RdRp_v2_sidock_01643211_r1_s-20_0
Workunit 53143476
Created 1 May 2024, 4:25:34 UTC
Sent 2 May 2024, 8:38:28 UTC
Report deadline 8 May 2024, 8:38:28 UTC
Received 2 May 2024, 13:04:30 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 56662
Run time 3 hours 18 min 54 sec
CPU time 3 hours 18 min 54 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.49 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 191.32 MB
Peak swap size 199.59 MB
Peak disk usage 20.16 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
09:49:59 (213742): wrapper (7.17.26016): starting
09:49:59 (213742): wrapper (7.17.26016): starting
09:49:59 (213742): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f962aa3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x7daae9042990]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11b)[0x7daae9099a1b]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7daae90428e6]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd7)[0x7daae90268b7]
/lib/x86_64-linux-gnu/libc.so.6(+0x27750)[0x7daae9027750]
/lib/x86_64-linux-gnu/libc.so.6(+0xa3ce7)[0x7daae90a3ce7]
/lib/x86_64-linux-gnu/libc.so.6(+0xa5f24)[0x7daae90a5f24]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7daae90a8873]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f962aa5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f962aa7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42990)[0x7daae9042990]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc1)[0x7daae90e5771]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7daae90f99b7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x49)[0x7daae9128159]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f962aa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f962aa1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x28150)[0x7daae9028150]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x89)[0x7daae9028209]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f962aa1aa3a]

Exiting...
12:55:45 (2912): wrapper (7.17.26016): starting
12:55:45 (2912): wrapper (7.17.26016): starting
12:55:45 (2912): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:03:04 (2912): cmdock exited; CPU time 3233.771004
14:03:04 (2912): app exit status: 0x8b
14:03:04 (2912): called boinc_finish(195)

</stderr_txt>
]]>


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