Task 81733759

Name corona_RdRp_v2_sidock_01663038_r1_s-20_0
Workunit 53203130
Created 9 May 2024, 15:05:32 UTC
Sent 10 May 2024, 14:05:25 UTC
Report deadline 16 May 2024, 14:05:25 UTC
Received 20 May 2024, 5:33:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 52220
Run time 9 days 14 hours 33 min 48 sec
CPU time 9 days 14 hours 23 min 49 sec
Validate state Task was reported too late to validate
Credit 0.00
Device peak FLOPS 1.07 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 193.21 MB
Peak swap size 200.18 MB
Peak disk usage 20.59 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
09:05:29 (850364): wrapper (7.17.26016): starting
09:05:30 (850364): wrapper (7.17.26016): starting
09:05:30 (850364): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x557e9e43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fb8bb642520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7fb8bb6a53fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x557e9e45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x557e9e47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fb8bb642520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7fb8bb6e57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7fb8bb6ea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fb8bb71bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x557e9e451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x557e9e41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fb8bb629d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fb8bb629e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x557e9e41aa3a]

Exiting...
11:28:00 (1494): wrapper (7.17.26016): starting
11:28:01 (1494): wrapper (7.17.26016): starting
11:28:01 (1494): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:33:21 (1494): cmdock exited; CPU time 306227.460305
00:33:21 (1494): called boinc_finish(0)

</stderr_txt>
]]>


©2024 SiDock@home Team