Task 81751671

Name corona_RdRp_v2_sidock_01671978_r2_s-20_0
Workunit 53221011
Created 9 May 2024, 15:21:16 UTC
Sent 14 May 2024, 0:38:10 UTC
Report deadline 20 May 2024, 0:38:10 UTC
Received 15 May 2024, 18:30:17 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 58377
Run time 21 sec
CPU time 3 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.65 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak disk usage 20.31 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
21:00:35 (3794): wrapper (7.17.26016): starting
21:00:35 (3794): wrapper (7.17.26016): starting
21:00:35 (3794): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64647e03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x70f83ba42520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x70f83ba969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x70f83ba42476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x70f83ba287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x70f83ba89676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x70f83baa0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x70f83baa2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x70f83baa5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64647e05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64647e07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x70f83ba42520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x70f83bae57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x70f83baea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x70f83bb1bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64647e051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64647e01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x70f83ba29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x70f83ba29e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64647e01aa3a]

Exiting...
21:47:13 (2396): wrapper (7.17.26016): starting
21:47:13 (2396): wrapper (7.17.26016): starting
21:47:13 (2396): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:47:18 (2396): cmdock exited; CPU time 3.332584
21:47:18 (2396): called boinc_finish(0)

</stderr_txt>
]]>


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