Task 81759440

Name	corona_RdRp_v2_sidock_01675849_r2_s-20_0
Workunit	53228753
Created	9 May 2024, 15:28:10 UTC
Sent	15 May 2024, 15:36:22 UTC
Report deadline	21 May 2024, 15:36:22 UTC
Received	20 May 2024, 14:17:30 UTC
Server state	Over
Outcome	Computation error
Client state	Aborted by user
Exit status	203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID	56743
Run time	1 days 14 hours 9 min 23 sec
CPU time	1 days 14 hours 7 min 24 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	8.77 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	194.68 MB
Peak swap size	201.52 MB
Peak disk usage	20.86 MB
Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
21:17:28 (55596): wrapper (7.17.26016): starting
21:17:28 (55596): wrapper (7.17.26016): starting
21:17:28 (55596): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x563e36c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f56e880f520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f56e88639fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f56e880f476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f56e87f57f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7f56e8856676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f56e886dcfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f56e886fa44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f56e8872453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x563e36c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x563e36c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f56e880f520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f56e88b27f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f56e88b7677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f56e88e8f2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x563e36c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x563e36c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f56e87f6d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f56e87f6e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x563e36c1aa3a]

Exiting...
21:50:24 (1529): wrapper (7.17.26016): starting
21:50:24 (1529): wrapper (7.17.26016): starting
21:50:24 (1529): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5589cc83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7ff00b0ac520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7ff00b1009fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7ff00b0ac476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7ff00b0927f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7ff00b0f3676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7ff00b10acfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7ff00b10ca44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7ff00b10f453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5589cc85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5589cc87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7ff00b0ac520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7ff00b14f7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7ff00b154677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7ff00b185f2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5589cc851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5589cc81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7ff00b093d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7ff00b093e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5589cc81aa3a]

Exiting...
21:53:30 (1576): wrapper (7.17.26016): starting
21:53:30 (1576): wrapper (7.17.26016): starting
21:53:30 (1576): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x558dc103ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fc6743fb520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7fc67444f9fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7fc6743fb476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fc6743e17f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7fc674442676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7fc674459cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7fc67445ba44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7fc67445e453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x558dc105c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x558dc107b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fc6743fb520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7fc67449e7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7fc6744a3677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fc6744d4f2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x558dc1051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x558dc101e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fc6743e2d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fc6743e2e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x558dc101aa3a]

Exiting...
22:29:59 (2529): wrapper (7.17.26016): starting
22:29:59 (2529): wrapper (7.17.26016): starting
22:29:59 (2529): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>